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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923761.1_cds_XP_016472279.1_64531
CDS Infomation

[gene=LOC107794310] [db_xref=GeneID:107794310] [protein=hydroxyproline O-galactosyltransferase HPGT3-like isoform X2] [protein_id=XP_016472279.1] [location=complement(join(8028..8050,8543..8655,9283..9354,10264..10314,10393..10480,10573..10696,10953..11025,11110..11170,16178..16368,16475..16524,17249..17312,17446..17588))] [gbkey=CDS]
Sequence

ATGGAGAGCATCTTGCCAACGACGTCGTTTTCGTCGTCGTCAAAATCGGAAAGGCGGTCA
AAATCAAAGTCTAGTCAAACATCTAAACCTTCTCTAGTAATGGCATTAATCTCTTGCTTC
GCTTGGTTATATGTCGCCGGAAGGTTATGGCAAGATGCAGAGTACAGAATGGTATTAGGT
AGTCTCTTGAAGAAGAACTCAGAGCAGAGACCAAAGATGCTGACAGTTGAAGACAAGCTA
ATGGTTTTAGGATGCAAGGATCTGGAGAGGAGAATAGTTGAAGTCGAAATGGAATTAACA
GTGGCTAAGAGTCAAGGTTACCTCAAGAATCAGTTGAAGCAGAGTGGTTCATCTTCGGGC
AAACAACTTCTGGCTGTTATAGGAATCTATACGGGATTCGGAGGTAGATTGAGGAGAAAT
GTGATCAGAGGGTCTTGGTTGCCAAATGTTGATGCTTTGTCGAAACTTGAAGAAAGAGGA
GTGGTTGTGCGATTTGTAATTGGTCGGAGTCCCAACCGTGGTGATAGCTTGGACCGCAAT
GTTAACGAGGAGAACCTAGCAACAAAAGATTTCTTGATTCTAGAAAGTCATGAGGAAGCT
CAGGAGGAATTGCCCAAGAAAGCTAAATATTTCTTTAGTTCAGCAATACAAAATTGGGAC
GCAGAGTTTTATGTGAAAGTTGATGACAACATTGATGTTGACCTTGATGGGTTGATTGAG
CTCCTTCAAAAACGGCGTGGTCAAAATAGTTCTTACATTGGATGCATGAAATCTGGAGAA
GTAGTTGCAGAAGAGGGAAGGGCATGGTATGAGCCAGAATGGTGGAAATTCGGAGATGAG
AAATCGTACTTCCGGCATGCAGCTGGTTCAGTTCTGGTGCTTTCCAAAAATTTGGCCCAG
TATATTAACATAAACAGTGCTTCCTTAAAGAGTTATGCGCATGAAGATACATCAATTGGA
TCATGGATGATGGGTCTTCAGACAACTTACATAGATGACAGCCGCCTATGCTGTAGCACC
TCCGGACAAGACAAAGTGTGCTCATTGGCTTGA

Peptide Sequence

PEP ID

XP_016472279.1
PEP Infomation

PREDICTED: hydroxyproline O-galactosyltransferase HPGT3-like isoform X2 [Nicotiana tabacum]
Sequence

MESILPTTSFSSSSKSERRSKSKSSQTSKPSLVMALISCFAWLYVAGRLWQDAEYRMVLG
SLLKKNSEQRPKMLTVEDKLMVLGCKDLERRIVEVEMELTVAKSQGYLKNQLKQSGSSSG
KQLLAVIGIYTGFGGRLRRNVIRGSWLPNVDALSKLEERGVVVRFVIGRSPNRGDSLDRN
VNEENLATKDFLILESHEEAQEELPKKAKYFFSSAIQNWDAEFYVKVDDNIDVDLDGLIE
LLQKRRGQNSSYIGCMKSGEVVAEEGRAWYEPEWWKFGDEKSYFRHAAGSVLVLSKNLAQ
YININSASLKSYAHEDTSIGSWMMGLQTTYIDDSRLCCSTSGQDKVCSLA

Transcript Sequence

Gene sequence data has not been registered.